

| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| 6-FAM (NHS Ester) |   |   | 496 | 516 | N/A | |
| 6-FAM (Fluorescein) |   |   | 495 | 520 | N/A | |
| Fluorescein dT |   |   |   | 495 | 520 | N/A | 
| Cy3™ |   |   |   | 550 | 564 | TYE™ 563 | 
| TAMRA™ |   | 559 | 583 | N/A | ||
| JOE (NHS Ester) |   |   | 529 | 555 | MAX (NHS Ester) | |
| Cy5™ |   |   |   | 648 | 668 | TYE™ 665 | 
| TAMRA (NHS Ester) |   |   |   | 559 | 583 | N/A | 
| MAX (NHS Ester) |   |   | 531 | 556 | JOE (NHS Ester) | |
| TET™ |   | 522 | 539 | N/A | ||
| Cy5.5™ |   |   | 685 | 706 | TYE 705 | |
| ROX (NHS Ester) |   |   | 588 | 608 | ATTO™ Rho101 (NHS Ester) | |
| TYE™ 563 |   |   | 549 | 563 | Cy3™ | |
| Yakima Yellow® |   | 524 | 551 | N/A | ||
| HEX |   | 538 | 555 | N/A | ||
| TEX 615 |   |   | 596 | 613 | Texas Red®-X (NHS Ester) | |
| TYE™ 665 |   |   | 645 | 665 | Cy5™ | |
| TYE 705 |   | 686 | 704 | Cy5.5™ | ||
| SUN |   | 538 | 554 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| ATTO™ 425 (NHS Ester) |   | 437 | 483 | N/A | ||
| ATTO™ 488 (NHS Ester) |   |   | 502 | 522 | Alexa Fluor® 488 (NHS Ester) | |
| ATTO™ 532 (NHS Ester) |   |   | 534 | 554 | N/A | |
| ATTO™ 550 (NHS Ester) |   |   | 560 | 575 | N/A | |
| ATTO™ 565 (NHS Ester) |   |   | 570 | 591 | N/A | |
| ATTO™ Rho101 (NHS Ester) |   |   | 592 | 609 | ROX (NHS Ester) | |
| ATTO™ 590 (NHS Ester) |   |   | 593 | 622 | Alexa Fluor® 594 (NHS Ester) | |
| ATTO™ 633 (NHS Ester) |   |   | 635 | 653 | N/A | |
| ATTO™ 647N (NHS Ester) |   |   | 649 | 662 | Alexa Fluor® 647 (NHS Ester) | |
| ATTO™ 700 (NHS Ester) |   | 700 | 719 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| Alexa Fluor® 488 (NHS Ester) |   |   | 492 | 517 | ATTO™ 488 (NHS Ester) | |
| Alexa Fluor® 532 (NHS Ester) |   |   | 527 | 553 | N/A | |
| Alexa Fluor® 546 (NHS Ester) |   |   | 556 | 571 | N/A | |
| Alexa Fluor® 594 (NHS Ester) |   |   | 584 | 616 | ATTO™ 590 (NHS Ester) | |
| Alexa Fluor® 647 (NHS Ester) |   |   | 650 | 670 | ATTO™ 647N (NHS Ester) | |
| Alexa Fluor® 660 (NHS Ester) |   |   | 661 | 691 | N/A | |
| Alexa Fluor® 750 (NHS Ester) |   |   | 753 | 782 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| 5' IRDye® 700 |   | 684 | 702 | N/A | ||
| 5' IRDye® 800 |   | 791 | 809 | N/A | ||
| 5' IRDye® 800CW (NHS Ester) |   | 767 | 791 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| Rhodamine Green™-X (NHS Ester) |   |   | 504 | 531 | N/A | |
| Rhodamine Red™ (NHS Ester) |   |   | 574 | 594 | N/A | |
| 5-TAMRA™ (Azide) |   |   | 546 | 579 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| 6-FAM (Azide) |   |   | 493 | 517 | N/A | |
| Alexa Fluor 405 |   | 401 | 421 | N/A | ||
| Texas Red®-X (NHS Ester) |   |   | 598 | 617 | TEX 615 | |
| Lightcycler® 640 (NHS Ester) |   |   | 620 | 635 | N/A | |
| Dy 750 (NHS Ester) |   | 747 | 776 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | Category | 
|---|---|---|---|---|---|---|---|
| Alexa Fluor 405 |   | 401 | 421 | N/A | Additional | ||
| ATTO™ 425 (NHS Ester) |   | 437 | 483 | N/A | ATTOTM Dyes | ||
| Alexa Fluor® 488 (NHS Ester) |   |   | 492 | 517 | ATTO™ 488 (NHS Ester) | Alexa Fluor® Dyes | |
| 6-FAM (Azide) |   |   | 493 | 517 | N/A | Additional | |
| 6-FAM (Fluorescein) |   |   | 495 | 520 | N/A | Freedom™ Dyes | |
| Fluorescein dT |   |   |   | 495 | 520 | N/A | Freedom™ Dyes | 
| 6-FAM (NHS Ester) |   |   | 496 | 516 | N/A | Freedom™ Dyes | |
| ATTO™ 488 (NHS Ester) |   |   | 502 | 522 | Alexa Fluor® 488 (NHS Ester) | ATTOTM Dyes | |
| Rhodamine Green™-X (NHS Ester) |   |   | 504 | 531 | N/A | Rhodamine Dyes | |
| TET™ |   | 522 | 539 | N/A | Freedom™ Dyes | ||
| Yakima Yellow® |   | 524 | 551 | N/A | Freedom™ Dyes | ||
| Alexa Fluor® 532 (NHS Ester) |   |   | 527 | 553 | N/A | Alexa Fluor® Dyes | |
| JOE (NHS Ester) |   |   | 529 | 555 | MAX (NHS Ester) | Freedom™ Dyes | |
| MAX (NHS Ester) |   |   | 531 | 556 | JOE (NHS Ester) | Freedom™ Dyes | |
| ATTO™ 532 (NHS Ester) |   |   | 534 | 554 | N/A | ATTOTM Dyes | |
| HEX |   | 538 | 555 | N/A | Freedom™ Dyes | ||
| SUN |   | 538 | 554 | N/A | Freedom™ Dyes | ||
| 5-TAMRA™ (Azide) |   |   | 546 | 579 | N/A | Rhodamine Dyes | |
| TYE™ 563 |   |   | 549 | 563 | Cy3™ | Freedom™ Dyes | |
| Cy3™ |   |   |   | 550 | 564 | TYE™ 563 | Freedom™ Dyes | 
| Alexa Fluor® 546 (NHS Ester) |   |   | 556 | 571 | N/A | Alexa Fluor® Dyes | |
| TAMRA™ |   | 559 | 583 | N/A | Freedom™ Dyes | ||
| TAMRA (NHS Ester) |   |   |   | 559 | 583 | N/A | Freedom™ Dyes | 
| ATTO™ 550 (NHS Ester) |   |   | 560 | 575 | N/A | ATTOTM Dyes | |
| ATTO™ 565 (NHS Ester) |   |   | 570 | 591 | N/A | ATTOTM Dyes | |
| Rhodamine Red™ (NHS Ester) |   |   | 574 | 594 | N/A | Rhodamine Dyes | |
| Alexa Fluor® 594 (NHS Ester) |   |   | 584 | 616 | ATTO™ 590 (NHS Ester) | Alexa Fluor® Dyes | |
| ROX (NHS Ester) |   |   | 588 | 608 | ATTO™ Rho101 (NHS Ester) | Freedom™ Dyes | |
| ATTO™ Rho101 (NHS Ester) |   |   | 592 | 609 | ROX (NHS Ester) | ATTOTM Dyes | |
| ATTO™ 590 (NHS Ester) |   |   | 593 | 622 | Alexa Fluor® 594 (NHS Ester) | ATTOTM Dyes | |
| TEX 615 |   |   | 596 | 613 | Texas Red®-X (NHS Ester) | Freedom™ Dyes | |
| Texas Red®-X (NHS Ester) |   |   | 598 | 617 | TEX 615 | Additional | |
| Lightcycler® 640 (NHS Ester) |   |   | 620 | 635 | N/A | Additional | |
| ATTO™ 633 (NHS Ester) |   |   | 635 | 653 | N/A | ATTOTM Dyes | |
| TYE™ 665 |   |   | 645 | 665 | Cy5™ | Freedom™ Dyes | |
| Cy5™ |   |   |   | 648 | 668 | TYE™ 665 | Freedom™ Dyes | 
| ATTO™ 647N (NHS Ester) |   |   | 649 | 662 | Alexa Fluor® 647 (NHS Ester) | ATTOTM Dyes | |
| Alexa Fluor® 647 (NHS Ester) |   |   | 650 | 670 | ATTO™ 647N (NHS Ester) | Alexa Fluor® Dyes | |
| Alexa Fluor® 660 (NHS Ester) |   |   | 661 | 691 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 700 |   | 684 | 702 | N/A | LI-COR IRDyes® | ||
| Cy5.5™ |   |   | 685 | 706 | TYE 705 | Freedom™ Dyes | |
| TYE 705 |   | 686 | 704 | Cy5.5™ | Freedom™ Dyes | ||
| ATTO™ 700 (NHS Ester) |   | 700 | 719 | N/A | ATTOTM Dyes | ||
| Dy 750 (NHS Ester) |   | 747 | 776 | N/A | Additional | ||
| Alexa Fluor® 750 (NHS Ester) |   |   | 753 | 782 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 800CW (NHS Ester) |   | 767 | 791 | N/A | LI-COR IRDyes® | ||
| 5' IRDye® 800 |   | 791 | 809 | N/A | LI-COR IRDyes® | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | Category | 
|---|---|---|---|---|---|---|---|
| Alexa Fluor 405 |   | 401 | 421 | N/A | Additional | ||
| ATTO™ 425 (NHS Ester) |   | 437 | 483 | N/A | ATTOTM Dyes | ||
| 6-FAM (NHS Ester) |   |   | 496 | 516 | N/A | Freedom™ Dyes | |
| Alexa Fluor® 488 (NHS Ester) |   |   | 492 | 517 | ATTO™ 488 (NHS Ester) | Alexa Fluor® Dyes | |
| 6-FAM (Azide) |   |   | 493 | 517 | N/A | Additional | |
| 6-FAM (Fluorescein) |   |   | 495 | 520 | N/A | Freedom™ Dyes | |
| Fluorescein dT |   |   |   | 495 | 520 | N/A | Freedom™ Dyes | 
| ATTO™ 488 (NHS Ester) |   |   | 502 | 522 | Alexa Fluor® 488 (NHS Ester) | ATTOTM Dyes | |
| Rhodamine Green™-X (NHS Ester) |   |   | 504 | 531 | N/A | Rhodamine Dyes | |
| TET™ |   | 522 | 539 | N/A | Freedom™ Dyes | ||
| Yakima Yellow® |   | 524 | 551 | N/A | Freedom™ Dyes | ||
| Alexa Fluor® 532 (NHS Ester) |   |   | 527 | 553 | N/A | Alexa Fluor® Dyes | |
| SUN |   | 538 | 554 | N/A | Freedom™ Dyes | ||
| ATTO™ 532 (NHS Ester) |   |   | 534 | 554 | N/A | ATTOTM Dyes | |
| JOE (NHS Ester) |   |   | 529 | 555 | MAX (NHS Ester) | Freedom™ Dyes | |
| HEX |   | 538 | 555 | N/A | Freedom™ Dyes | ||
| MAX (NHS Ester) |   |   | 531 | 556 | JOE (NHS Ester) | Freedom™ Dyes | |
| TYE™ 563 |   |   | 549 | 563 | Cy3™ | Freedom™ Dyes | |
| Cy3™ |   |   |   | 550 | 564 | TYE™ 563 | Freedom™ Dyes | 
| Alexa Fluor® 546 (NHS Ester) |   |   | 556 | 571 | N/A | Alexa Fluor® Dyes | |
| ATTO™ 550 (NHS Ester) |   |   | 560 | 575 | N/A | ATTOTM Dyes | |
| 5-TAMRA™ (Azide) |   |   | 546 | 579 | N/A | Rhodamine Dyes | |
| TAMRA™ |   | 559 | 583 | N/A | Freedom™ Dyes | ||
| TAMRA (NHS Ester) |   |   |   | 559 | 583 | N/A | Freedom™ Dyes | 
| ATTO™ 565 (NHS Ester) |   |   | 570 | 591 | N/A | ATTOTM Dyes | |
| Rhodamine Red™ (NHS Ester) |   |   | 574 | 594 | N/A | Rhodamine Dyes | |
| ROX (NHS Ester) |   |   | 588 | 608 | ATTO™ Rho101 (NHS Ester) | Freedom™ Dyes | |
| ATTO™ Rho101 (NHS Ester) |   |   | 592 | 609 | ROX (NHS Ester) | ATTOTM Dyes | |
| TEX 615 |   |   | 596 | 613 | Texas Red®-X (NHS Ester) | Freedom™ Dyes | |
| Alexa Fluor® 594 (NHS Ester) |   |   | 584 | 616 | ATTO™ 590 (NHS Ester) | Alexa Fluor® Dyes | |
| Texas Red®-X (NHS Ester) |   |   | 598 | 617 | TEX 615 | Additional | |
| ATTO™ 590 (NHS Ester) |   |   | 593 | 622 | Alexa Fluor® 594 (NHS Ester) | ATTOTM Dyes | |
| Lightcycler® 640 (NHS Ester) |   |   | 620 | 635 | N/A | Additional | |
| ATTO™ 633 (NHS Ester) |   |   | 635 | 653 | N/A | ATTOTM Dyes | |
| ATTO™ 647N (NHS Ester) |   |   | 649 | 662 | Alexa Fluor® 647 (NHS Ester) | ATTOTM Dyes | |
| TYE™ 665 |   |   | 645 | 665 | Cy5™ | Freedom™ Dyes | |
| Cy5™ |   |   |   | 648 | 668 | TYE™ 665 | Freedom™ Dyes | 
| Alexa Fluor® 647 (NHS Ester) |   |   | 650 | 670 | ATTO™ 647N (NHS Ester) | Alexa Fluor® Dyes | |
| Alexa Fluor® 660 (NHS Ester) |   |   | 661 | 691 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 700 |   | 684 | 702 | N/A | LI-COR IRDyes® | ||
| TYE 705 |   | 686 | 704 | Cy5.5™ | Freedom™ Dyes | ||
| Cy5.5™ |   |   | 685 | 706 | TYE 705 | Freedom™ Dyes | |
| ATTO™ 700 (NHS Ester) |   | 700 | 719 | N/A | ATTOTM Dyes | ||
| Dy 750 (NHS Ester) |   | 747 | 776 | N/A | Additional | ||
| Alexa Fluor® 750 (NHS Ester) |   |   | 753 | 782 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 800CW (NHS Ester) |   | 767 | 791 | N/A | LI-COR IRDyes® | ||
| 5' IRDye® 800 |   | 791 | 809 | N/A | LI-COR IRDyes® |